Fare Guide

Estimated lowest fares found within 7 days

Cheapest Airline Sky Express

The cheapest airline(s) flying from Heraklion to Thessaloniki is Sky Express.

  • Sky Express Sky Express
  • Aegean Airlines Aegean Airlines
  • Hahn Air Hahn Air
Cheapest Month January

Travel Period: December 2024 - November 2025

The cheapest month(s) to fly from Heraklion to Thessaloniki is January.

  • Dec 2024
  • Jan 2025
  • Feb 2025
  • Mar 2025
  • Apr 2025
  • May 2025
  • Jun 2025
  • Jul 2025
  • Aug 2025
  • Sep 2025
  • Oct 2025
  • Nov 2025
Cheapest Day of the Week Tuesday

The cheapest day(s) of the week to fly from Heraklion to Thessaloniki is Tuesday.

  • Sun Sunday
  • Mon Monday
  • Tue Tuesday
  • Wed Wednesday
  • Thu Thursday
  • Fri Friday
  • Sat Saturday

Flight Schedules

Last Updated: Sat, 2 Nov, 2024

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  • Availability
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  • 08:50 HER
    10:05 SKG
    1Hrs, 15m Direct
  • HERIrakleion Airport 08:50 - SKG 10:05 1h 15m Direct
  • HERIrakleion Airport 08:50
  • SKGThessaloniki Airport 10:05
  • 1h 15m
  • Direct
  • Sky Express (GQ 561)Airbus A320 Neo
  • Sky Express (GQ 561)
    • M
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    • -
    • -
    • -
  • Airbus A320 Neo
  • 09:25 HER
    10:40 SKG
    1Hrs, 15m Direct
  • HERIrakleion Airport 09:25 - SKG 10:40 1h 15m Direct
  • HERIrakleion Airport 09:25
  • SKGThessaloniki Airport 10:40
  • 1h 15m
  • Direct
  • Sky Express (GQ 561)Airbus A320 Neo
  • Sky Express (GQ 561)
    • -
    • -
    • -
    • -
    • -
    • S
    • -
  • Airbus A320 Neo
  • 09:50 HER
    11:00 SKG
    1Hrs, 10m Direct
  • HERIrakleion Airport 09:50 - SKG 11:00 1h 10m Direct
  • HERIrakleion Airport 09:50
  • SKGThessaloniki Airport 11:00
  • 1h 10m
  • Direct
  • Aegean Airlines (A3 571)Airbus
  • Aegean Airlines (A3 571)
    • -
    • -
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    • -
    • F
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    • S
  • Airbus
  • 14:00 HER
    15:15 SKG
    1Hrs, 15m Direct
  • HERIrakleion Airport 14:00 - SKG 15:15 1h 15m Direct
  • HERIrakleion Airport 14:00
  • SKGThessaloniki Airport 15:15
  • 1h 15m
  • Direct
  • Sky Express (GQ 561)Airbus A320 Neo
  • Sky Express (GQ 561)
    • -
    • -
    • -
    • -
    • F
    • -
    • -
  • Airbus A320 Neo
  • 14:45 HER
    16:00 SKG
    1Hrs, 15m Direct
  • HERIrakleion Airport 14:45 - SKG 16:00 1h 15m Direct
  • HERIrakleion Airport 14:45
  • SKGThessaloniki Airport 16:00
  • 1h 15m
  • Direct
  • Ryanair (FR 2116)Boeing 737 800
  • Ryanair (FR 2116)
    • -
    • -
    • -
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    • -
    • -
    • -
  • Boeing 737 800
  • 15:00 HER
    16:15 SKG
    1Hrs, 15m Direct
  • HERIrakleion Airport 15:00 - SKG 16:15 1h 15m Direct
  • HERIrakleion Airport 15:00
  • SKGThessaloniki Airport 16:15
  • 1h 15m
  • Direct
  • Sky Express (GQ 561)Airbus A320 Neo
  • Sky Express (GQ 561)
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Airbus A320 Neo
  • 19:50 HER
    21:00 SKG
    1Hrs, 10m Direct
  • HERIrakleion Airport 19:50 - SKG 21:00 1h 10m Direct
  • HERIrakleion Airport 19:50
  • SKGThessaloniki Airport 21:00
  • 1h 10m
  • Direct
  • Aegean Airlines (A3 575)Airbus
  • Aegean Airlines (A3 575)
    • M
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    • -
    • -
  • Airbus
  • 23:40 HER
    00:55 SKG
    1Hrs, 15m Direct
  • HERIrakleion Airport 23:40 - SKG 00:55 1h 15m Direct
  • HERIrakleion Airport 23:40
  • SKGThessaloniki Airport 00:55
  • 1h 15m
  • Direct
  • Ryanair (FR 2116)Boeing 737 Max 8 Passenger
  • Ryanair (FR 2116)
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • Boeing 737 Max 8 Passenger
  • 06:20 HER
    10:35 SKG
    4Hrs, 15m 1 Stop (ATH)
  • HERIrakleion Airport 06:20 - SKG 10:35 4h 15m 1 Stop (ATH) Athens
  • HERIrakleion Airport 06:20
    ATHAthens Airport 09:40
  • ATHAthens Airport 07:10
    SKGThessaloniki Airport 10:35
  • 4h 15m (2h 30m)
  • 1 Stop ATH · Athens 2h 30m
  • Aegean Airlines (A3 301)Airbus
    Aegean Airlines (A3 110)Airbus A320 Neo
  • Aegean Airlines (A3 301)
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  • 06:20 HER
    08:55 SKG
    2Hrs, 35m 1 Stop (ATH)
  • HERIrakleion Airport 06:20 - SKG 08:55 2h 35m 1 Stop (ATH) Athens
  • HERIrakleion Airport 06:20
    ATHAthens Airport 08:00
  • ATHAthens Airport 07:10
    SKGThessaloniki Airport 08:55
  • 2h 35m (50m)
  • 1 Stop ATH · Athens 50m
  • Aegean Airlines (A3 301)Airbus
    Aegean Airlines (A3 104)Airbus A321 Neo
  • Aegean Airlines (A3 301)
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  • 08:00 HER
    11:25 SKG
    3Hrs, 25m 1 Stop (ATH)
  • HERIrakleion Airport 08:00 - SKG 11:25 3h 25m 1 Stop (ATH) Athens
  • HERIrakleion Airport 08:00
    ATHAthens Airport 10:30
  • ATHAthens Airport 08:50
    SKGThessaloniki Airport 11:25
  • 3h 25m (1h 40m)
  • 1 Stop ATH · Athens 1h 40m
  • Sky Express (GQ 211)Airbus A320 Neo
    Sky Express (GQ 382)Airbus A320 Neo
  • Sky Express (GQ 211)
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  • 08:10 HER
    12:20 SKG
    4Hrs, 10m 1 Stop (ATH)
  • HERIrakleion Airport 08:10 - SKG 12:20 4h 10m 1 Stop (ATH) Athens
  • HERIrakleion Airport 08:10
    ATHAthens Airport 11:25
  • ATHAthens Airport 09:05
    SKGThessaloniki Airport 12:20
  • 4h 10m (2h 20m)
  • 1 Stop ATH · Athens 2h 20m
  • Aegean Airlines (A3 303)Airbus A321 Neo
    Aegean Airlines (A3 114)Airbus
  • Aegean Airlines (A3 303)
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  • 11:00 HER
    15:45 SKG
    4Hrs, 45m 1 Stop (ATH)
  • HERIrakleion Airport 11:00 - SKG 15:45 4h 45m 1 Stop (ATH) Athens
  • HERIrakleion Airport 11:00
    ATHAthens Airport 14:50
  • ATHAthens Airport 11:50
    SKGThessaloniki Airport 15:45
  • 4h 45m (3h)
  • 1 Stop ATH · Athens 3h
  • Sky Express (GQ 213)Airbus A320 Neo
    Sky Express (GQ 384)Atr
  • Sky Express (GQ 213)
    • -
    • -
    • -
    • -
    • F
    • -
    • -
  • 11:35 HER
    15:40 SKG
    4Hrs, 05m 1 Stop (ATH)
  • HERIrakleion Airport 11:35 - SKG 15:40 4h 05m 1 Stop (ATH) Athens
  • HERIrakleion Airport 11:35
    ATHAthens Airport 14:45
  • ATHAthens Airport 12:25
    SKGThessaloniki Airport 15:40
  • 4h 05m (2h 20m)
  • 1 Stop ATH · Athens 2h 20m
  • Aegean Airlines (A3 307)Airbus A321 Neo
    Aegean Airlines (A3 118)Airbus
  • Aegean Airlines (A3 307)
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  • 12:00 HER
    15:45 SKG
    3Hrs, 45m 1 Stop (ATH)
  • HERIrakleion Airport 12:00 - SKG 15:45 3h 45m 1 Stop (ATH) Athens
  • HERIrakleion Airport 12:00
    ATHAthens Airport 14:50
  • ATHAthens Airport 12:50
    SKGThessaloniki Airport 15:45
  • 3h 45m (2h)
  • 1 Stop ATH · Athens 2h
  • Sky Express (GQ 213)Airbus A320 Neo
    Sky Express (GQ 384)Atr
  • Sky Express (GQ 213)
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • 12:40 HER
    17:45 SKG
    5Hrs, 05m 1 Stop (ATH)
  • HERIrakleion Airport 12:40 - SKG 17:45 5h 05m 1 Stop (ATH) Athens
  • HERIrakleion Airport 12:40
    ATHAthens Airport 16:50
  • ATHAthens Airport 13:30
    SKGThessaloniki Airport 17:45
  • 5h 05m (3h 20m)
  • 1 Stop ATH · Athens 3h 20m
  • Sky Express (GQ 213)Airbus A320 Neo
    Sky Express (GQ 386)Airbus A320 Neo
  • Sky Express (GQ 213)
    • -
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  • 12:40 HER
    15:45 SKG
    3Hrs, 05m 1 Stop (ATH)
  • HERIrakleion Airport 12:40 - SKG 15:45 3h 05m 1 Stop (ATH) Athens
  • HERIrakleion Airport 12:40
    ATHAthens Airport 14:50
  • ATHAthens Airport 13:30
    SKGThessaloniki Airport 15:45
  • 3h 05m (1h 20m)
  • 1 Stop ATH · Athens 1h 20m
  • Sky Express (GQ 213)Airbus A320 Neo
    Sky Express (GQ 384)Atr
  • Sky Express (GQ 213)
    • -
    • T
    • -
    • T
    • -
    • -
    • -
  • 14:40 HER
    18:00 SKG
    3Hrs, 20m 1 Stop (ATH)
  • HERIrakleion Airport 14:40 - SKG 18:00 3h 20m 1 Stop (ATH) Athens
  • HERIrakleion Airport 14:40
    ATHAthens Airport 17:05
  • ATHAthens Airport 15:30
    SKGThessaloniki Airport 18:00
  • 3h 20m (1h 35m)
  • 1 Stop ATH · Athens 1h 35m
  • Sky Express (GQ 213)Airbus A320 Neo
    Sky Express (GQ 386)Airbus A320 Neo
  • Sky Express (GQ 213)
    • -
    • -
    • -
    • -
    • -
    • S
    • -
  • 15:00 HER
    19:50 SKG
    4Hrs, 50m 1 Stop (ATH)
  • HERIrakleion Airport 15:00 - SKG 19:50 4h 50m 1 Stop (ATH) Athens
  • HERIrakleion Airport 15:00
    ATHAthens Airport 19:00
  • ATHAthens Airport 15:50
    SKGThessaloniki Airport 19:50
  • 4h 50m (3h 10m)
  • 1 Stop ATH · Athens 3h 10m
  • Aegean Airlines (A3 315)Airbus A321 Neo
    Aegean Airlines (A3 124)Airbus
  • Aegean Airlines (A3 315)
    • -
    • -
    • -
    • -
    • F
    • -
    • S
  • 15:00 HER
    19:00 SKG
    4Hrs, 00m 1 Stop (ATH)
  • HERIrakleion Airport 15:00 - SKG 19:00 4h 1 Stop (ATH) Athens
  • HERIrakleion Airport 15:00
    ATHAthens Airport 18:05
  • ATHAthens Airport 15:50
    SKGThessaloniki Airport 19:00
  • 4h (2h 15m)
  • 1 Stop ATH · Athens 2h 15m
  • Aegean Airlines (A3 315)Airbus A321 Neo
    Aegean Airlines (A3 122)Airbus
  • Aegean Airlines (A3 315)
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    • S
  • 15:15 HER
    17:45 SKG
    2Hrs, 30m 1 Stop (ATH)
  • HERIrakleion Airport 15:15 - SKG 17:45 2h 30m 1 Stop (ATH) Athens
  • HERIrakleion Airport 15:15
    ATHAthens Airport 16:50
  • ATHAthens Airport 16:05
    SKGThessaloniki Airport 17:45
  • 2h 30m (45m)
  • 1 Stop ATH · Athens 45m
  • Sky Express (GQ 213)Airbus A320 Neo
    Sky Express (GQ 386)Airbus A320 Neo
  • Sky Express (GQ 213)
    • M
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    • -
  • 16:35 HER
    19:50 SKG
    3Hrs, 15m 1 Stop (ATH)
  • HERIrakleion Airport 16:35 - SKG 19:50 3h 15m 1 Stop (ATH) Athens
  • HERIrakleion Airport 16:35
    ATHAthens Airport 19:00
  • ATHAthens Airport 17:25
    SKGThessaloniki Airport 19:50
  • 3h 15m (1h 35m)
  • 1 Stop ATH · Athens 1h 35m
  • Aegean Airlines (A3 323)Airbus
    Aegean Airlines (A3 124)Airbus
  • Aegean Airlines (A3 323)
    • -
    • -
    • -
    • -
    • F
    • -
    • S
  • 16:35 HER
    20:50 SKG
    4Hrs, 15m 1 Stop (ATH)
  • HERIrakleion Airport 16:35 - SKG 20:50 4h 15m 1 Stop (ATH) Athens
  • HERIrakleion Airport 16:35
    ATHAthens Airport 19:55
  • ATHAthens Airport 17:25
    SKGThessaloniki Airport 20:50
  • 4h 15m (2h 30m)
  • 1 Stop ATH · Athens 2h 30m
  • Aegean Airlines (A3 323)Airbus
    Aegean Airlines (A3 126)Airbus A320 Neo
  • Aegean Airlines (A3 323)
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  • 18:20 HER
    23:03 SKG
    4Hrs, 43m 1 Stop (ATH)
  • HERIrakleion Airport 18:20 - SKG 23:03 4h 43m 1 Stop (ATH) Athens
  • HERIrakleion Airport 18:20
    ATHAthens Airport 22:10
  • ATHAthens Airport 19:10
    SKGThessaloniki Airport 23:03
  • 4h 43m (3h)
  • 1 Stop ATH · Athens 3h
  • Sky Express (GQ 215)Airbus A320 Neo
    Sky Express (GQ 390)Airbus A320 Neo
  • Sky Express (GQ 215)
    • M
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    • -
    • -
    • -
  • 18:20 HER
    21:10 SKG
    2Hrs, 50m 1 Stop (ATH)
  • HERIrakleion Airport 18:20 - SKG 21:10 2h 50m 1 Stop (ATH) Athens
  • HERIrakleion Airport 18:20
    ATHAthens Airport 20:15
  • ATHAthens Airport 19:10
    SKGThessaloniki Airport 21:10
  • 2h 50m (1h 05m)
  • 1 Stop ATH · Athens 1h 05m
  • Sky Express (GQ 215)Airbus A320 Neo
    Sky Express (GQ 388)Airbus A320 Neo
  • Sky Express (GQ 215)
    • M
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    • -
    • -
    • -
  • 18:25 HER
    22:25 SKG
    4Hrs, 00m 1 Stop (ATH)
  • HERIrakleion Airport 18:25 - SKG 22:25 4h 1 Stop (ATH) Athens
  • HERIrakleion Airport 18:25
    ATHAthens Airport 21:30
  • ATHAthens Airport 19:15
    SKGThessaloniki Airport 22:25
  • 4h (2h 15m)
  • 1 Stop ATH · Athens 2h 15m
  • Aegean Airlines (A3 319)Airbus A321 Neo
    Aegean Airlines (A3 128)Airbus
  • Aegean Airlines (A3 319)
    • -
    • T
    • W
    • T
    • F
    • S
    • S
  • 18:50 HER
    23:03 SKG
    4Hrs, 13m 1 Stop (ATH)
  • HERIrakleion Airport 18:50 - SKG 23:03 4h 13m 1 Stop (ATH) Athens
  • HERIrakleion Airport 18:50
    ATHAthens Airport 22:10
  • ATHAthens Airport 19:40
    SKGThessaloniki Airport 23:03
  • 4h 13m (2h 30m)
  • 1 Stop ATH · Athens 2h 30m
  • Sky Express (GQ 215)Airbus A320 Neo
    Sky Express (GQ 390)Airbus A320 Neo
  • Sky Express (GQ 215)
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • 18:50 HER
    21:10 SKG
    2Hrs, 20m 1 Stop (ATH)
  • HERIrakleion Airport 18:50 - SKG 21:10 2h 20m 1 Stop (ATH) Athens
  • HERIrakleion Airport 18:50
    ATHAthens Airport 20:15
  • ATHAthens Airport 19:40
    SKGThessaloniki Airport 21:10
  • 2h 20m (35m)
  • 1 Stop ATH · Athens 35m
  • Sky Express (GQ 215)Airbus A320 Neo
    Sky Express (GQ 388)Airbus A320 Neo
  • Sky Express (GQ 215)
    • -
    • -
    • -
    • -
    • -
    • -
    • S
  • 18:55 HER
    21:10 SKG
    2Hrs, 15m 1 Stop (ATH)
  • HERIrakleion Airport 18:55 - SKG 21:10 2h 15m 1 Stop (ATH) Athens
  • HERIrakleion Airport 18:55
    ATHAthens Airport 20:15
  • ATHAthens Airport 19:45
    SKGThessaloniki Airport 21:10
  • 2h 15m (30m)
  • 1 Stop ATH · Athens 30m
  • Sky Express (GQ 215)Airbus A320 Neo
    Sky Express (GQ 388)Airbus A320 Neo
  • Sky Express (GQ 215)
    • -
    • -
    • -
    • -
    • F
    • S
    • -
  • 18:55 HER
    23:03 SKG
    4Hrs, 08m 1 Stop (ATH)
  • HERIrakleion Airport 18:55 - SKG 23:03 4h 08m 1 Stop (ATH) Athens
  • HERIrakleion Airport 18:55
    ATHAthens Airport 22:10
  • ATHAthens Airport 19:45
    SKGThessaloniki Airport 23:03
  • 4h 08m (2h 25m)
  • 1 Stop ATH · Athens 2h 25m
  • Sky Express (GQ 215)Airbus A320 Neo
    Sky Express (GQ 390)Airbus A320 Neo
  • Sky Express (GQ 215)
    • -
    • -
    • -
    • -
    • F
    • S
    • -
  • 21:45 HER
    00:20 SKG
    2Hrs, 35m 1 Stop (ATH)
  • HERIrakleion Airport 21:45 - SKG 00:20 2h 35m 1 Stop (ATH) Athens
  • HERIrakleion Airport 21:45
    ATHAthens Airport 23:25
  • ATHAthens Airport 22:35
    SKGThessaloniki Airport 00:20
  • 2h 35m (50m)
  • 1 Stop ATH · Athens 50m
  • Aegean Airlines (A3 321)Airbus A321 Neo
    Aegean Airlines (A3 136)Airbus A320 Neo
  • Aegean Airlines (A3 321)
    • M
    • T
    • W
    • T
    • F
    • S
    • S
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What’s the fastest flight time from Heraklion to Thessaloniki?

The fastest flight time for direct flights from Heraklion to Thessaloniki is 1 hour 10 minutes. Check latest flight schedules & prices on Wego.

What’s the most popular airline flying from Heraklion to Thessaloniki?

The most popular airline flying from Heraklion to Thessaloniki is Sky Express. Find the latest flight deals on Wego.

How far is Thessaloniki from Heraklion?

The flight distance between Heraklion and Thessaloniki is 620km. Check all available flights on Wego.

When is the earliest and latest flight of the day?

The earliest flight of the day departs at 06:20. The last flight of the day departs at 06:20. See the full list of flight times on Wego.

How many airlines offer direct flights from Heraklion to Thessaloniki?

There are 3 airlines that offer direct flights from Heraklion to Thessaloniki. Find out the list of airlines on Wego.